TY - JOUR
T1 - Climate–ecosystem modelling made easy
T2 - The Land Sites Platform
AU - Keetz, Lasse T.
AU - Lieungh, Eva
AU - Karimi-Asli, Kaveh
AU - Geange, Sonya R.
AU - Gelati, Emiliano
AU - Tang, Hui
AU - Yilmaz, Yeliz A.
AU - Aas, Kjetil S.
AU - Althuizen, Inge H.J.
AU - Bryn, Anders
AU - Falk, Stefanie
AU - Fisher, Rosie
AU - Fouilloux, Anne
AU - Horvath, Peter
AU - Indrehus, Sunniva
AU - Lee, Hanna
AU - Lombardozzi, Danica
AU - Parmentier, Frans Jan W.
AU - Pirk, Norbert
AU - Vandvik, Vigdis
AU - Vollsnes, Ane V.
AU - Skarpaas, Olav
AU - Stordal, Frode
AU - Tallaksen, Lena M.
N1 - Publisher Copyright:
© 2023 The Authors. Global Change Biology published by John Wiley & Sons Ltd.
PY - 2023/8
Y1 - 2023/8
N2 - Dynamic Global Vegetation Models (DGVMs) provide a state-of-the-art process-based approach to study the complex interplay between vegetation and its physical environment. For example, they help to predict how terrestrial plants interact with climate, soils, disturbance and competition for resources. We argue that there is untapped potential for the use of DGVMs in ecological and ecophysiological research. One fundamental barrier to realize this potential is that many researchers with relevant expertize (ecology, plant physiology, soil science, etc.) lack access to the technical resources or awareness of the research potential of DGVMs. Here we present the Land Sites Platform (LSP): new software that facilitates single-site simulations with the Functionally Assembled Terrestrial Ecosystem Simulator, an advanced DGVM coupled with the Community Land Model. The LSP includes a Graphical User Interface and an Application Programming Interface, which improve the user experience and lower the technical thresholds for installing these model architectures and setting up model experiments. The software is distributed via version-controlled containers; researchers and students can run simulations directly on their personal computers or servers, with relatively low hardware requirements, and on different operating systems. Version 1.0 of the LSP supports site-level simulations. We provide input data for 20 established geo-ecological observation sites in Norway and workflows to add generic sites from public global datasets. The LSP makes standard model experiments with default data easily achievable (e.g., for educational or introductory purposes) while retaining flexibility for more advanced scientific uses. We further provide tools to visualize the model input and output, including simple examples to relate predictions to local observations. The LSP improves access to land surface and DGVM modelling as a building block of community cyberinfrastructure that may inspire new avenues for mechanistic ecosystem research across disciplines.
AB - Dynamic Global Vegetation Models (DGVMs) provide a state-of-the-art process-based approach to study the complex interplay between vegetation and its physical environment. For example, they help to predict how terrestrial plants interact with climate, soils, disturbance and competition for resources. We argue that there is untapped potential for the use of DGVMs in ecological and ecophysiological research. One fundamental barrier to realize this potential is that many researchers with relevant expertize (ecology, plant physiology, soil science, etc.) lack access to the technical resources or awareness of the research potential of DGVMs. Here we present the Land Sites Platform (LSP): new software that facilitates single-site simulations with the Functionally Assembled Terrestrial Ecosystem Simulator, an advanced DGVM coupled with the Community Land Model. The LSP includes a Graphical User Interface and an Application Programming Interface, which improve the user experience and lower the technical thresholds for installing these model architectures and setting up model experiments. The software is distributed via version-controlled containers; researchers and students can run simulations directly on their personal computers or servers, with relatively low hardware requirements, and on different operating systems. Version 1.0 of the LSP supports site-level simulations. We provide input data for 20 established geo-ecological observation sites in Norway and workflows to add generic sites from public global datasets. The LSP makes standard model experiments with default data easily achievable (e.g., for educational or introductory purposes) while retaining flexibility for more advanced scientific uses. We further provide tools to visualize the model input and output, including simple examples to relate predictions to local observations. The LSP improves access to land surface and DGVM modelling as a building block of community cyberinfrastructure that may inspire new avenues for mechanistic ecosystem research across disciplines.
KW - Application Programming Interface (API)
KW - Community Land Model (CLM)
KW - Docker container
KW - Dynamic Global Vegetation Model (DGVM)
KW - Functionally Assembled Terrestrial Ecosystem Simulator (FATES)
KW - Graphical User Interface (GUI)
KW - Land Surface Model (LSM)
KW - ecological modelling
UR - https://www.scopus.com/pages/publications/85161637913
U2 - 10.1111/gcb.16808
DO - 10.1111/gcb.16808
M3 - Article
C2 - 37303068
AN - SCOPUS:85161637913
SN - 1354-1013
VL - 29
SP - 4440
EP - 4452
JO - Global Change Biology
JF - Global Change Biology
IS - 15
ER -